BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024H11SP1|AL428299
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1483 750 0.0
3x_Contig1410 502 e-142
>3x_Contig1483
Length = 9730
Score = 750 bits (378), Expect = 0.0
Identities = 379/380 (99%)
Strand = Plus / Minus
Query: 588 gtacaacctaaatccaccaagagagaattctttgatgccattgaaatcgaagaccatagc 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9730 gtacaacctaaatccaccaagagagaattctttgatgccattgaaatcgaagaccatagc 9671
Query: 648 aacaacgtcgtcatagaaggcgatatacaactgatgatggaaaatttccaattccatttc 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9670 aacaacgtcgtcatagaaggcgatatacaactgatgatggaaaatttccaattccatttc 9611
Query: 708 gattcaacggaccctcaaatggataagaagctcttcctcagcatttgttccaaaatatgg 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9610 gattcaacggaccctcaaatggataagaagctcttcctcagcatttgttccaaaatatgg 9551
Query: 768 gacgatgtagtaagcagggaataggcgctccttttccccaccctcatataacatatttgt 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9550 gacgatgtagtaagcagggaataggcgctccttttccccaccctcatataacatatttgt 9491
Query: 828 aactttaaacaacttgatcgagtgcatggcgtcactagaccatccagatgaataacggtt 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9490 aactttaaacaacttgatcgagtgcatggcgtcactagaccatccagatgaataacggtt 9431
Query: 888 gggacagacgtgacactctgtcacgtgacactcgtggtcacgtggctcacgtaatcggat 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9430 gggacagacgtgacactctgtcacgtgacactcgtggtcacgtggctcacgtaatcggat 9371
Query: 948 ttccggtcgtyctctacgcg 967
|||||||||| |||||||||
Sbjct: 9370 ttccggtcgtcctctacgcg 9351
>3x_Contig1410
Length = 7640
Score = 502 bits (253), Expect = e-142
Identities = 280/285 (98%), Gaps = 3/285 (1%)
Strand = Plus / Minus
Query: 1 atgaaaacacgaaacttgctgagaaagctggtaccagcatcaaaaataataataatatta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 285 atgaaaacacgaaacttgctgagaaagctggtaccagcatcaaaaataataataatatga 226
Query: 61 cagcctcagacctggaaactgacaaatcatcctcaagtaattcgatagatggtaccacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 cagcctcagacctggaaactgacaaatcatcctcaagtaattcgatagatggtaccacca 166
Query: 121 ctcctggtaccgagacttcaatcaacacttccaagagtcaatccaaatcattgaaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ctcctggtaccgagacttcaatcaacacttccaagagtcaatccaaatcattgaaaagaa 106
Query: 181 ataacataccaaaaccacttacgttaaaatcaaagcaaaatacacctaatggatcattac 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 at-acataccaaaaccacttacgttaaaatcaaagcaaaatacacctaatggatcattac 47
Query: 241 ccaatataaggtcagctccaccgatggtaacaagacatccaattc 285
||||||||||||||||| || ||||||| ||||||||||||||||
Sbjct: 46 ccaatataaggtcagct-caacgatggt-acaagacatccaattc 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7453
Number of Sequences: 1807
Number of extensions: 7453
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 2
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)